{"id":12573,"date":"2024-03-22T11:52:34","date_gmt":"2024-03-22T10:52:34","guid":{"rendered":"https:\/\/www.ceab.csic.es\/unique-facilities\/laboratori-de-biologia-computacional\/"},"modified":"2024-06-17T09:23:41","modified_gmt":"2024-06-17T07:23:41","slug":"computational-biology-laboratory","status":"publish","type":"page","link":"https:\/\/www.ceab.csic.es\/en\/unique-facilities\/computational-biology-laboratory\/","title":{"rendered":"Computational Biology Laboratory (CBLab)"},"content":{"rendered":"\t\t<div data-elementor-type=\"wp-page\" data-elementor-id=\"12573\" class=\"elementor elementor-12573 elementor-5560\" data-elementor-post-type=\"page\">\n\t\t\t\t<div data-dce-background-image-url=\"https:\/\/www.ceab.csic.es\/wp-content\/uploads\/2024\/03\/computacio.jpg\" class=\"elementor-element elementor-element-e8cf384 e-con-full e-flex e-con e-parent\" data-id=\"e8cf384\" data-element_type=\"container\" data-settings=\"{&quot;background_background&quot;:&quot;classic&quot;}\">\n\t\t\t\t<div class=\"elementor-element elementor-element-4569c10 elementor-widget-mobile__width-initial elementor-widget elementor-widget-button\" data-id=\"4569c10\" data-element_type=\"widget\" data-widget_type=\"button.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<div class=\"elementor-button-wrapper\">\n\t\t\t\t\t<a class=\"elementor-button elementor-button-link elementor-size-sm\" href=\"https:\/\/www.ceab.csic.es\/en\/unique-facilities\/\">\n\t\t\t\t\t\t<span class=\"elementor-button-content-wrapper\">\n\t\t\t\t\t\t<span class=\"elementor-button-icon\">\n\t\t\t\t<i aria-hidden=\"true\" class=\"fas fa-angle-double-left\"><\/i>\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t<span class=\"elementor-button-text\">Unique facilities<\/span>\n\t\t\t\t\t<\/span>\n\t\t\t\t\t<\/a>\n\t\t\t\t<\/div>\n\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t<div class=\"elementor-element elementor-element-e831f68 e-con-full e-flex e-con e-child\" data-id=\"e831f68\" data-element_type=\"container\">\n\t\t<div class=\"elementor-element elementor-element-19c57c4 e-con-full e-flex e-con e-child\" data-id=\"19c57c4\" data-element_type=\"container\">\n\t\t\t\t<div class=\"elementor-element elementor-element-2a21d30 animated-slow elementor-invisible elementor-widget elementor-widget-qi_addons_for_elementor_animated_text\" data-id=\"2a21d30\" data-element_type=\"widget\" data-settings=\"{&quot;_animation&quot;:&quot;fadeIn&quot;}\" data-widget_type=\"qi_addons_for_elementor_animated_text.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<div class=\"qodef-shortcode qodef-m qodef-qi-animated-text qodef--animated-by-letter qodef-qi--has-appear qodef--appear-from-bottom\" data-appear-delay=\"200\">\n\t\t<p class=\"qodef-m-title\">\n\t\t<span class=\"qodef-e-word-holder\">Unique<\/span> <span class=\"qodef-e-word-holder\">facilities<\/span>\t<\/p>\n<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-d44f342 animated-slow elementor-invisible elementor-widget elementor-widget-qi_addons_for_elementor_animated_text\" data-id=\"d44f342\" data-element_type=\"widget\" data-settings=\"{&quot;_animation&quot;:&quot;fadeIn&quot;}\" data-widget_type=\"qi_addons_for_elementor_animated_text.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<div class=\"qodef-shortcode qodef-m qodef-qi-animated-text qodef--animated-by-letter qodef-qi--has-appear qodef--appear-from-bottom\" data-appear-delay=\"200\">\n\t\t<h1 class=\"qodef-m-title\">\n\t\t<span class=\"qodef-e-word-holder\">Computational<\/span> <span class=\"qodef-e-word-holder\">Biology<\/span> <span class=\"qodef-e-word-holder\">Laboratory<\/span> <span class=\"qodef-e-word-holder\">(CBLab)<\/span>\t<\/h1>\n<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t<div class=\"elementor-element elementor-element-748ec2b e-flex e-con-boxed e-con e-parent\" data-id=\"748ec2b\" data-element_type=\"container\">\n\t\t\t\t\t<div class=\"e-con-inner\">\n\t\t<div class=\"elementor-element elementor-element-cca2e03 e-con-full e-flex e-con e-child\" data-id=\"cca2e03\" data-element_type=\"container\">\n\t\t\t\t<div class=\"elementor-element elementor-element-f3fb1c4 elementor-widget__width-initial elementor-widget elementor-widget-heading\" data-id=\"f3fb1c4\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h2 class=\"elementor-heading-title elementor-size-default\">The laboratory was created in response to the growing demand for computing capacity linked to the frontier R&amp;D carried out at the CEAB and linked to various aspects of ecology.<\/h2>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-07b344f elementor-widget__width-initial elementor-widget elementor-widget-text-editor\" data-id=\"07b344f\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p>It boasts a <strong>High-Performance Computing Cluster<\/strong> (CAR Cluster) for shared use, funded by the centre\u2019s infrastructure resources and the Spanish Ministry of Economy and Competitiveness.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t<div class=\"elementor-element elementor-element-fae506a e-flex e-con-boxed e-con e-child\" data-id=\"fae506a\" data-element_type=\"container\">\n\t\t\t\t\t<div class=\"e-con-inner\">\n\t\t<div class=\"elementor-element elementor-element-82f2a64 e-con-full e-flex e-con e-child\" data-id=\"82f2a64\" data-element_type=\"container\">\n\t\t\t\t<div class=\"elementor-element elementor-element-a3f7ac4 elementor-widget__width-initial elementor-widget elementor-widget-text-editor\" data-id=\"a3f7ac4\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><strong>Equipment and features:<br \/><\/strong>The total capacity of the CAR Cluster comprises 13 computing nodes, totalling 284 processors, 2671 GB of RAM and 65 TB of high-performance disk space, in addition to 4 NAS storage units for various research projects linked to the cluster, each with a capacity of about 43 TB. It also has four servers totalling 72 cores and 312G of RAM for uses beyond computing (such as virtual machines and servers related to training and citizen science transmission).<br \/><br \/><strong>Scientific goals:<\/strong><\/p><p><strong>1. <\/strong>To boost <strong>bioinformatics and molecular ecology<\/strong> at the CEAB by organising, centralising and periodically updating all the bioinformatics software used by the centre, and increasing computing capabilities.<\/p><p><strong>2.<\/strong> To boost <strong>theoretical and computational ecology<\/strong> by developing and implementing statistical, mathematical and simulation techniques applied to ecological systems. To increase computing capacity, centralise and update software in R, Matlab or Python in order to perform theoretical studies and statistical analyses with high demand for computational resources (e.g. Bootstrapping).<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t<div class=\"elementor-element elementor-element-c3df468 e-con-full e-flex e-con e-child\" data-id=\"c3df468\" data-element_type=\"container\">\n\t\t\t\t<div class=\"elementor-element elementor-element-5138ab2 elementor-widget__width-initial elementor-widget elementor-widget-text-editor\" data-id=\"5138ab2\" data-element_type=\"widget\" data-widget_type=\"text-editor.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t\t\t<p><strong>3. <\/strong>To facilitate and promote the use of all kinds of techniques typical of machine learning and artificial intelligence, such as <strong>Knowledge Discovery in Databases (KDD), data mining and expert systems<\/strong>, organising and centralising software for this purpose and training researchers in these disciplines, which are already essential in advanced ecology studies<\/p><p><strong>4. <\/strong>To boost <strong>training<\/strong>. In order to lay the foundations for a more quantitative and conceptually sound ecology, it is necessary for new generations of ecologists to learn programming languages and understand the operation and usefulness of a CAR Cluster. However, training in disciplines such as algorithms and data mining, database management, GIS applications, etc., is necessary. This learning enables more powerful scientific tools to solve complex problems. In this sense, the CBLab not only focuses on the CAR cluster but also aims to be a \u201cliving\u201d laboratory with the involvement of support technicians and researchers from the centre, consultants (individuals or groups), interdisciplinary workshops and others. The aim is to establish operational bridges between theory and empiricism, producing a more quantitative and interdisciplinary ecology.<\/p>\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t<div class=\"elementor-element elementor-element-a4fe2c6 e-con-full e-flex e-con e-child\" data-id=\"a4fe2c6\" data-element_type=\"container\" data-settings=\"{&quot;background_background&quot;:&quot;slideshow&quot;,&quot;background_slideshow_gallery&quot;:[],&quot;background_slideshow_loop&quot;:&quot;yes&quot;,&quot;background_slideshow_slide_duration&quot;:5000,&quot;background_slideshow_slide_transition&quot;:&quot;fade&quot;,&quot;background_slideshow_transition_duration&quot;:500}\">\n\t\t<div data-dce-background-color=\"#084054\" class=\"elementor-element elementor-element-e4e0884 e-con-full e-flex e-con e-child\" data-id=\"e4e0884\" data-element_type=\"container\" data-settings=\"{&quot;background_background&quot;:&quot;gradient&quot;}\">\n\t\t\t\t<div class=\"elementor-element elementor-element-b1c58b6 elementor-widget elementor-widget-heading\" data-id=\"b1c58b6\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h3 class=\"elementor-heading-title elementor-size-default\">Information for users<\/h3>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-bf6b6dd elementor-widget elementor-widget-heading\" data-id=\"bf6b6dd\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<div class=\"elementor-heading-title elementor-size-default\">The CBLab \u2013 in particular its basic infrastructure (CAR cluster) \u2013 provides a cross-cutting service to all CEAB research groups, while also providing services to external users.<\/div>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t<div class=\"elementor-element elementor-element-06e1981 e-flex e-con-boxed e-con e-child\" data-id=\"06e1981\" data-element_type=\"container\">\n\t\t\t\t\t<div class=\"e-con-inner\">\n\t\t\t\t<div class=\"elementor-element elementor-element-6bbea7a elementor-widget elementor-widget-heading\" data-id=\"6bbea7a\" data-element_type=\"widget\" data-widget_type=\"heading.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t<h3 class=\"elementor-heading-title elementor-size-default\">Contact<\/h3>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<div class=\"elementor-element elementor-element-1a0caae elementor-icon-list--layout-traditional elementor-list-item-link-full_width elementor-widget elementor-widget-icon-list\" data-id=\"1a0caae\" data-element_type=\"widget\" data-widget_type=\"icon-list.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<ul class=\"elementor-icon-list-items\">\n\t\t\t\t\t\t\t<li class=\"elementor-icon-list-item\">\n\t\t\t\t\t\t\t\t\t\t\t<a href=\"mailto:cblab@ceab.csic.es\">\n\n\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-icon-list-icon\">\n\t\t\t\t\t\t\t<i aria-hidden=\"true\" class=\"fas fa-envelope\"><\/i>\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-icon-list-text\">cblab@ceab.csic.es<\/span>\n\t\t\t\t\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t<\/li>\n\t\t\t\t\t\t\t\t<li class=\"elementor-icon-list-item\">\n\t\t\t\t\t\t\t\t\t\t\t<a href=\"https:\/\/tic.ceab.csic.es\/cblabdoc\/doku.php\" target=\"_blank\">\n\n\t\t\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-icon-list-icon\">\n\t\t\t\t\t\t\t<i aria-hidden=\"true\" class=\"fas fa-globe\"><\/i>\t\t\t\t\t\t<\/span>\n\t\t\t\t\t\t\t\t\t\t<span class=\"elementor-icon-list-text\">CBLab Wiki<\/span>\n\t\t\t\t\t\t\t\t\t\t\t<\/a>\n\t\t\t\t\t\t\t\t\t<\/li>\n\t\t\t\t\t\t<\/ul>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t<div class=\"elementor-element elementor-element-e1db22c e-flex e-con-boxed e-con e-child\" data-id=\"e1db22c\" data-element_type=\"container\">\n\t\t\t\t\t<div class=\"e-con-inner\">\n\t\t<div class=\"elementor-element elementor-element-fceb178 e-con-full e-flex e-con e-child\" data-id=\"fceb178\" data-element_type=\"container\" data-settings=\"{&quot;background_background&quot;:&quot;slideshow&quot;,&quot;background_slideshow_gallery&quot;:[],&quot;background_slideshow_loop&quot;:&quot;yes&quot;,&quot;background_slideshow_slide_duration&quot;:5000,&quot;background_slideshow_slide_transition&quot;:&quot;fade&quot;,&quot;background_slideshow_transition_duration&quot;:500}\">\n\t\t\t\t<div class=\"elementor-element elementor-element-0cc3ef9 elementor-arrows-position-outside elementor-widget elementor-widget-image-carousel\" data-id=\"0cc3ef9\" data-element_type=\"widget\" data-settings=\"{&quot;slides_to_show&quot;:&quot;4&quot;,&quot;navigation&quot;:&quot;arrows&quot;,&quot;autoplay&quot;:&quot;no&quot;,&quot;image_spacing_custom&quot;:{&quot;unit&quot;:&quot;px&quot;,&quot;size&quot;:5,&quot;sizes&quot;:[]},&quot;infinite&quot;:&quot;yes&quot;,&quot;speed&quot;:500,&quot;image_spacing_custom_laptop&quot;:{&quot;unit&quot;:&quot;px&quot;,&quot;size&quot;:&quot;&quot;,&quot;sizes&quot;:[]},&quot;image_spacing_custom_tablet&quot;:{&quot;unit&quot;:&quot;px&quot;,&quot;size&quot;:&quot;&quot;,&quot;sizes&quot;:[]},&quot;image_spacing_custom_mobile&quot;:{&quot;unit&quot;:&quot;px&quot;,&quot;size&quot;:&quot;&quot;,&quot;sizes&quot;:[]}}\" data-widget_type=\"image-carousel.default\">\n\t\t\t\t<div class=\"elementor-widget-container\">\n\t\t\t\t\t\t\t<div class=\"elementor-image-carousel-wrapper swiper\" role=\"region\" aria-roledescription=\"carousel\" aria-label=\"Image Carousel\" dir=\"ltr\">\n\t\t\t<div class=\"elementor-image-carousel swiper-wrapper\" aria-live=\"polite\">\n\t\t\t\t\t\t\t\t<div class=\"swiper-slide\" role=\"group\" aria-roledescription=\"slide\" aria-label=\"1 of 4\"><figure class=\"swiper-slide-inner\"><img decoding=\"async\" class=\"swiper-slide-image\" src=\"https:\/\/www.ceab.csic.es\/wp-content\/uploads\/2024\/03\/cblab-4.jpg\" alt=\"Laboratori de biologia computacional (CBLab) 4\" \/><\/figure><\/div><div class=\"swiper-slide\" role=\"group\" aria-roledescription=\"slide\" aria-label=\"2 of 4\"><figure class=\"swiper-slide-inner\"><img decoding=\"async\" class=\"swiper-slide-image\" src=\"https:\/\/www.ceab.csic.es\/wp-content\/uploads\/2024\/03\/cblab-2.jpg\" alt=\"Laboratori de biologia computacional (CBLab) 2\" \/><\/figure><\/div><div class=\"swiper-slide\" role=\"group\" aria-roledescription=\"slide\" aria-label=\"3 of 4\"><figure class=\"swiper-slide-inner\"><img decoding=\"async\" class=\"swiper-slide-image\" src=\"https:\/\/www.ceab.csic.es\/wp-content\/uploads\/2024\/03\/cblab-1.jpg\" alt=\"Laboratori de biologia computacional (CBLab) 1\" \/><\/figure><\/div><div class=\"swiper-slide\" role=\"group\" aria-roledescription=\"slide\" aria-label=\"4 of 4\"><figure class=\"swiper-slide-inner\"><img decoding=\"async\" class=\"swiper-slide-image\" src=\"https:\/\/www.ceab.csic.es\/wp-content\/uploads\/2024\/03\/cblab-3.jpg\" alt=\"Laboratori de biologia computacional (CBLab) 3\" \/><\/figure><\/div>\t\t\t<\/div>\n\t\t\t\t\t\t\t\t\t\t\t\t<div class=\"elementor-swiper-button elementor-swiper-button-prev\" role=\"button\" tabindex=\"0\">\n\t\t\t\t\t\t<i aria-hidden=\"true\" class=\"eicon-chevron-left\"><\/i>\t\t\t\t\t<\/div>\n\t\t\t\t\t<div class=\"elementor-swiper-button elementor-swiper-button-next\" role=\"button\" tabindex=\"0\">\n\t\t\t\t\t\t<i aria-hidden=\"true\" class=\"eicon-chevron-right\"><\/i>\t\t\t\t\t<\/div>\n\t\t\t\t\n\t\t\t\t\t\t\t\t\t<\/div>\n\t\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t","protected":false},"excerpt":{"rendered":"<p>Unique facilities Unique facilities Computational Biology Laboratory (CBLab) The laboratory was created in response to the growing demand for computing capacity linked to the frontier R&#038;D carried out at the CEAB and linked to various aspects of ecology. It boasts a High-Performance Computing Cluster (CAR Cluster) for shared use, funded by the centre\u2019s infrastructure resources&hellip;&nbsp;<a href=\"https:\/\/www.ceab.csic.es\/en\/unique-facilities\/computational-biology-laboratory\/\" rel=\"bookmark\"><span class=\"screen-reader-text\">Computational Biology Laboratory (CBLab)<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":12371,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-templates\/template-pagebuilder-full-width.php","meta":{"_acf_changed":false,"neve_meta_sidebar":"","neve_meta_container":"","neve_meta_enable_content_width":"off","neve_meta_content_width":100,"neve_meta_title_alignment":"","neve_meta_author_avatar":"","neve_post_elements_order":"","neve_meta_disable_header":"","neve_meta_disable_footer":"","neve_meta_disable_title":"","footnotes":""},"class_list":["post-12573","page","type-page","status-publish","hentry"],"acf":[],"yoast_head":"<!-- This site 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